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Comparative and pangenomic analysis of the genus Streptomyces
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First Monoploid Reference Sequence of Sugarcane
… for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …
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User Programs
… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of …
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An analysis of codon bias in six red yeast species
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha … improved  T. cacao Matina 1-6 genome is now available for comparative purposes on the latest version of the JGI plant …
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Comparative Genomics Analysis of Trichoderma reesei Strains
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. …
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IMG/M 4 version of the integrated metagenome comparative analysis system
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Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi
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