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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… fungal guilds in a range of different locations. They sampled soils in four forest ecosystems, extracted RNA to … understanding of multiple forest systems, this work sets up protocols and pipelines that other teams can use around the … These tools give researchers a way to access much more information about fungi in these environments. “Now with …
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Natural Prodcast Episode 5: Brad Moore
… one, and we said, “Well, why don’t we have you know, the bioinformaticians go against the chemists.” And so to the … in some cases where there’s very little even genomic information there, as well. So I think it’s a way to sort of … can dart inside a big bloom, and they can collect water samples. And when they collect water samples they can filter …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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The Busy World of Deep Sea Eruptions
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New Research Sheds Light on Diversity in the Deep Sea
… and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand how … discovered genera of bacteria and archaea. Many of the samples shared a high prevalence of genes involved in sulfur … 339, lead Peter Girguis) for sequencing several of the samples. …
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Single Cell Research Group
R., … Banfield J. F., Hugenholtz P., Woyke T . Minimum information about a single amplified genome (MISAG) and a …
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The Power of One, Amplified
… cells from a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add … In recent years, advances in sequencing technologies and bioinformatic tools have helped decode the genomes of tens of … through metagenomics. Such techniques take advantage of bioinformatics tools for  extracting snippets of microbial …
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Corals in Hot Water Get Help From Their Microbes
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Party in the Rhizosphere
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software … Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well …
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Decoding Yellowstone’s Microbial Mats
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to … many statistical tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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