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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal … 99.8% Q3 2026 175     2,164     Q4 2026 175     2,208     *Includes Illumina and PacBio sequencing platforms. …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, … analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, …
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Natural Prodcast Episode 15: Katherine Duncan
… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … Kate Duncan: Oh, goodness. I mean, if you were to find my scientific papers, that would be Katherine. Dan Udwary: … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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User Support
… Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor … of Institutional User Agreements Coordinating with JGI scientific and technical experts Project design with …
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Automated annotation of scientific texts for ML-based keyphrase extraction and validation
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Genome‐Wide Association Study Identifies Candidate Loci Underlying Agronomic Traits in a Middle American Diversity Panel of Common Bean
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Association of functionally significant Melanocortin-4 but not Melanocortin-3 receptor mutations with severe adult obesity in a large North American case–control study
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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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Biosynthesis of Cytosporones in Leotiomycetous Filamentous Fungi
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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