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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of … the SODmap Mobile app enabled SOD Blitz participants to geotag specimens they collect. Later, those are annotated with …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following …
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Microbiome Data Science Team
… Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human … al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in …
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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Flow cytometric monitoring of bacterioplankton phenotypic diversity predicts high population‐specific feeding rates by invasive dreissenid mussels
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DOE Metrics
… hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new …
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Exploring Phages at JGI
… of working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate …
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JGI Announces 2025 New Investigator Portfolio
… (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have … whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will investigate a … and the metabolic pathways of algae. They will harness JGI capabilities such as metatranscriptomics and …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics … tool to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship … Modeled on the JGI-UC Merced internship program, a similar collaboration …
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Natural Prodcast Episode 17: Cassandra Quave
… of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N …
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