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Natural Prodcast Episode 19: Bill Fenical
… we want to talk a little bit about. It’s sort of early stages. But I think that is emblematic of some of the … underwater. But thankfully that worked out. And I spent 30, 40 years diving all over the world and bringing samples … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Making a Lichen Together
… For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at … The scientists also sequenced the fungus and photobiont’s genomes and compared them to close relatives who don’t …
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Plant Microbial Interactions Group
… 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon compound that plays an … quest in a future episode of our JGI podcast, Genome Insider. I’m Alison Takemura. See you next time. …
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Open Frameworks Training the Next Generation of Scientists
… in 15 individual classrooms across the country, training 316 students in fungal biology, bioinformatics, and … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a …
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Thousands of small, novel genes predicted in global phage genomes
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JGI Welcomes New UEC Members
… a breadth of institutions, research topics and career stages. The election period concluded on October 21. The … To view the full roster of members visit the UEC page . …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … that were acquired through it were usually only around 30% complete.  Described in  ISME Communications , a method …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those … project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …
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