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Association mapping by aerial drone reveals 213 genetic associations for Sorghum bicolor biomass traits under drought
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Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
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Isolation of Histone from Sorghum Leaf Tissue for Top Down Mass Spectrometry Profiling of Potential Epigenetic Markers.
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A Grass Model to Help Improve Giant Miscanthus
… candidate bioenergy feedstock crops such as sugarcane and sorghum. The  M. sinensis genome analysis explains the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … in collecting and submitting their microbiome samples for sequencing at the JGI cannot be overstated. Their … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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A Grass Model to Help Improve Giant Miscanthus
… candidate bioenergy feedstock crops such as sugarcane and sorghum. The M. sinensis genome analysis explains the hybrid …
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Frequently Asked Questions: Proposal Submission
… contact us in advance for advice. … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … Energy’s funding of the JGI. … No, the proposal is only for sequencing, metabolomics and/or synthesis effort at the JGI. … in your proposal. … While, in general, requests will be for sequencing and its analysis, investigators are encouraged to …
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Secondary Metabolites Program
We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … We are also utilizing DNA-Affinity Purification (DAP) sequencing to express hundreds of transcription factors and …
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A sorghum genome-wide association study (GWAS) identifies a WRKY transcription factor as a candidate gene underlying sugarcane aphid (Melanaphis sacchari) resistance
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Natural Prodcast Episode 17: Cassandra Quave
… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … to understand more about plant natural products? We have sequencing facilities, DNA synthesis, metabolomics. Where do …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — …
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