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… “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … for JGI to work on these, as it allows us to highlight hot topics in genomics.” And it makes sense to Woyke why JGI … need to relate to (meta)genomics, and at least one of the papers they reference should be hot off the press. She tells …

Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact library … on project Plant and Algal Standard Draft Whole genome shotgun sequencing.  Sequencing methodology  varies depending …

… the DOE Office of Science Graduate Student Research (SCGSR) program , which awards graduate students the … with Simon Roux and David Paez-Espino. Rambo found the SCGSR research experience was “an ideal opportunity for me … the JGI has shaped his post-graduate school plans. “The SCGSR gave me some great insight into my career path,” he …

… year, the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students the opportunity to … research programs. Among the recipients of the latest SCGSR award is Mo Kaze, part of the 2018 cohort of the … Dr. Tringe will also serve as a mentor for another SCGSR awardee, Ian Rambo from Brett Baker’s lab at the …

Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri …

Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in … diversity. As pioneers of this field, the JGI has leveraged metagenomics to boost understanding of environmental …

… the screen method on a microbial community from geothermal hot springs, they uncovered a novel cellulose-degrading … small pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on …