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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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Towards a balanced view of the bacterial tree of life
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Toward a Data Infrastructure for the Plant Cell Atlas.
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A Taxonomy of Bacterial Microcompartment Loci Constructed by a Novel Scoring Method
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Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant …
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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back … Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the … Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … us to select specific uncultivated microbes for sequencing based on their level of metabolic activity (BONCAT+FACS). To …
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At the Forefront of Terrestrial Virus Research
Gary Trubl is finishing his PhD in Microbiology at The Ohio State University, co-advised by Drs. Virginia Rich and Matthew …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising … juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … you want to have enzymes that you can apply in a route towards many different compounds in the same family. And so …
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