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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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How to Submit Sequencing Samples
… prior to shipment to the  JGI. The documents below (posted with permission) demonstrate the importance of proper … sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your … materials.  PI will receive a shipping approval email with shipping instructions.  Provide your shipping address …
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Plant Microbial Interactions Group
… of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and … Selected Publications …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along with highlighting the viruses in a given sample, … identifying viruses across many thousands of genomes and metagenomes, called geNomad (watch Antonio Camargo present …
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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A Bioinformatician's Guide to Metagenomics
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Accelerating Metagenomics Discoveries with Deep Learning
… Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to harness deep … to become much simpler; instead of aligning sequences with popular, but computationally costly approaches such as … (inferred chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The …
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Behind the Paper: Hot Springs Metagenomics
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Microbial Genomics & Metagenomics (MGM) Workshop
… highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) … sequence data and enables the user to analyze these data with existing bioinformatic methods to bridge the gap from …
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DNA Synthesis Program
… been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … and biosystems. It The program fosters collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. …
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Natural Prodcast Episode 4: Nancy Keller
… we’re going to be presenting some conversations we had with scientists in the field of natural products. So, it’s a … I chatted about science. This episode is our conversation with Nancy Keller, a fantastic fungal natural products … should be a few more in the feed, that I’m releasing along with this one, at the same time.   But now, here’s the …
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