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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are … Plant microbiomes hold the amazing ability to influence plant development, fitness and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … in this hypersaline environment, which can range from 8% to 28% salinity. We have toxic metals, so these concentrations … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. … up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter or MoClo assemblies … Check out our organism-agnostic CRISPR gRNA design tool  …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Multiplex Editing of the Nucleoredoxin1 Tandem Array in Poplar: From Small Indels to Translocations and Complex Inversions
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … 2007 the full genome was sequenced and published in the journal Science . At the time, the project was co-led by Daniel … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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