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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in …
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Chromosome assembled and annotated genome sequence of Aspergillus flavus NRRL 3357
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Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …
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Bacterial Genome Annotation
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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First Monoploid Reference Sequence of Sugarcane
… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, … as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with …
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … tissues of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence …
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