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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To … and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how …
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Jane Grimwood Named HudsonAlpha Genomics Chair
City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … a terabase — of soil RNA for this project, and produced the reference genomes that allowed for mapping these RNA reads. …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass …
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