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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … that these genome copies that are spread throughout the whole cell are actually contained within a structure that … cell and advances microbial research.” One Giant Bacterium, Multiple Research Questions For the team, characterizing Ca. …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest data repositories …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the …
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Whole genome sequence of the denitrifying thermophile Geobacillus thermodenitrificans subsp. calidus DSM 22629T
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Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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Accelerating Metagenomics Discoveries with Deep Learning
Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or isolated strains, … learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of these … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … Head at the JGI.  Along with an improved understanding of multiple forest systems, this work sets up protocols and …
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Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate
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Whole genome assembly from 454 sequencing output via modified DNA graph concept
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