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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which …
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Synthesis
… assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and … and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA … … gRNA-SeqRET … BOOST … Synthesis Platform Lead … More Resources … Software Engineers in the Synthetic Biology …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … as the rhizosphere), researchers hope this massive and integrated data set will help identify how different … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … and one of his email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … factor of 16. The same year, the JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to …
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PhycoCosm, a comparative algal genomics resource
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … technologies have led to an abundance of microbial genomes becoming available to the global research … Information (NCBI) GenBank collection and on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) database. …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint … they don’t have available in their labs, and we use our resources to help them solve those problems. It’s a … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so …
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IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
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MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources
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