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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … Science Program and was already available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Silver age of GOLD introduces new features
… data are accessible on JGI data portals including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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A Sorghum Pangenome Opens More Doors to Discovery
… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … and Environmental Research (BER) program to apply systems biology approaches to plants relevant to national … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach
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Mapping the Earth’s Hidden Fungal Kingdom
… one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … logistical and analytical. How can the research community systematically sample an ancient, hyperdiverse kingdom while …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … and the tools to compare them are available on the JGI’s Integrated Microbial Genomes & Microbiomes ( IMG/M ) portal. … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Biotech Partners
… Biotech Partners provides integrated and high-touch programs that empower underrepresented high school students and graduates to step outside their boundaries and dream …
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Mining Metagenomes for Cas Proteins
… discovery was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … no. DE-AC02-05CH11231. The work was supported in part by grants from the Paul Allen Frontiers Group, the National … the the Lawrence Berkeley National Laboratory’s Sustainable Systems Scientific Focus Area is funded by the U.S. …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … factor of 16. The same year, the JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to …
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