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Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants
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A Plant Root Atlas for Tracking Developmental Trajectories
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond models,” he said. Cole annotated cell …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … Central de Venezuela (Venezuela); University of Silesia (Poland); Aberystwyth University (UK); HudsonAlpha Institute … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Marine algae and land plants share conserved phytochrome signaling systems
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Community Science Program
… Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … call is for projects that translate genomic information into biological function. The  New Investigator and …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … but also the ability to understand the complicated evolutionary history of strawberry in such detail is …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … feedstock known for its ability to grow on marginal lands and to tolerate stressors such as drought and … award number BBS/E/W/0012843A. DSR is grateful for support from the Chan-Zuckerberg BioHub and the Marthella Foskett …
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Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)
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Help from Citrus’ Bitter, Hardier Cousin
… that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us … orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the …
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Data Ecosystem
… A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …
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Special Initiatives & Programs
… with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … located in geographically distinct areas and use different plants both for laboratory research and for improving … Researchers also study ways to develop valuable byproducts from lignin left over after biomass processing. Great Lakes …
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A korarchaeal genome reveals insights into the evolution of the Archaea
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