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Novel and Emerging Capabilities that Can Provide a Holistic Understanding of the Plant Root Microbiome
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… KAROLINA:  We all know plants take up water through their roots. But for them to be able to pull that water through … And when those stomata are open, it’s the same pore in the leaf through which carbon dioxide enters the leaf for … these CAM-C3 hybrids. KAROLINA:  Some of these hybrid genotypes that I look at can preferentially up-regulate CAM …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Root morphology and exudate availability are shaped by particle size and chemistry in Brachypodium distachyon
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KARRIKIN INSENSITIVE2 regulates leaf development, root system architecture and arbuscular‐mycorrhizal symbiosis in Brachypodium distachyon
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Partners
… The JGI leverages its existing partnerships and develops others providing … with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA …
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Medicago root nodule microbiomes: insights into a complex ecosystem with potential candidates for plant growth promotion
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway …
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A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … and agriculture. Understanding the compositions of river microbiomes—who the core microbes are and what they do—can … researchers develop predictive watershed scale models to manage river ecosystems. One application for the information is …
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