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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis … The reference genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program …
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Webinar: MycoCosm Tutorial
… Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on … While are still working on finalizing the tree and related publication the tree is still in development and not … Q: Has there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: …
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A roadmap for equitable reuse of public microbiome data
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … to soil carbon storage during simulated range shifts of plant-fungal symbionts …
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Game On: High School Students Drive Everglades Metagenomics Study
… decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … their genomes were “remarkably” stable. “We thought we were sequencing the same genome multiple times,” Schmutz … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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