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A roadmap for equitable reuse of public microbiome data
Learn more
Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Rice SNP-seek database update: new SNPs, indels, and queries
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CSP Functional Genomics
… into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … and genome function, particularly those not readily achievable without the capabilities and expertise available at the JGI. Proposals to this call may be submitted …
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How To Use Our Systems
… who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Webinars on Offerings & Capabilities
… by better understanding the capabilities and resources available for your project. Watch all the webinars here . You can find additional webinars covering how to use our data portals here.  …
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Project Management Office
… JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the submission of samples for …
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Webinar: MycoCosm Tutorial
… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … While are still working on finalizing the tree and related publication the tree is still in development and not … the Browse page tool to compare your own data with the JGI database? A: You can use custom tracks menu item to load …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … to do manual annotation – not covered in these tutorials 6.  Q: On the genome synteny page, would it be possible to …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) … **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE Metrics There were 2,627 … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …
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Integrating Experimentation with Data
… for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their … Automated Laboratories: Integrating Experimentation with Data” was held at the Seattle Marriott Waterfront in … Data Integration and Modeling This three-day joint meeting featured insightful presentations, dynamic panel …
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