Search

Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … really they’re asked by us to just review these proposals based on what’s uploaded, right? Don’t read between the …

… called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … conduct their research. Designed to reduce the effects of taxonomic representation biases during marker selection, …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … us to select specific uncultivated microbes for sequencing based on their level of metabolic activity (BONCAT+FACS). To …

… scientific projects. These solutions include large-scale genome variants analyses, next-generation transcriptome de … assembly, metagenome and metatranscriptome assembly, Hadoop based on sequence analysis framework, etc. For example, this … metagenome binning software … Education … Selected Publications … Software …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …