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Single-cell profiling of Arabidopsis leaves to Pseudomonas syringae infection
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … German Collection of Microorganisms and Cell Cultures GmbH, based in Braunschweig, Germany. The BGC Repertoire in … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history
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Metagenomic reconstructions of bacterial CRISPR loci constrain population histories
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Genomic Changes Associated with the Evolutionary Transitions of Nostoc to a Plant Symbiont
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Assembly of the Boechera retrofracta Genome and Evolutionary Analysis of Apomixis-Associated Genes
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The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation Guidelines RNA … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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Natural Prodcast Episode 15: Katherine Duncan
… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … So then you have this chemical profile. And this is a game based on all those limitations. That’s what you’ve got in … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Draft Genome Sequences of Chlamydiales Bacterium STE3 and Neochlamydia sp. Strain AcF84, Endosymbionts of Acanthamoeba spp.
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … models, Miscanthus has a large and complex genome whose evolutionary history and perennial lifecycle makes it important to study …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … but also the ability to understand the complicated evolutionary history of strawberry in such detail is … Our method clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of …
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