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For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy … Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available online at  PhycoCosm …

Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … metadata to JGI database for shipping approval (n/a if using web-based form) All shipments originating outside the … samples move through QC and into the library and sequencing pipelines.  You will receive automated emails as raw …

… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … biofuel grasses can be studied from simpler (and smaller) models, Miscanthus has a large and complex genome whose …

DNA is manually separated into a few different groups based on its density — DNA containing isotopes is “heavier” … National Laboratory and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … National Laboratory, have developed a semi-automated pipeline to apply robotics to the process. This automation …

Open Green Genomes hits milestone with C. richardii The Science Fern … has set out to generate high-quality genome assemblies and annotations for 35 species representing all major … framework can inform the efficient production of plant-based biofuels and bioproducts.  Summary A recent paper …

… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … biofuel grasses can be studied from simpler (and smaller) models,  Miscanthus has a large and complex genome whose …

So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not …

… cutting-edge capabilities to help advance their science by generating data in three overarching categories: Sequencing, …

UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … was done through the JGI Community Science Program . Using an ecology metric called beta diversity, the team … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no …