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Doubling Down on Known Protein Families
… wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists … body — they may take some of those families and try to functionally characterize them because they are very …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… lead the Forest Pathology and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of …
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An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, … and exa- scales on multicore and many core architectures with the ultimate objective of facilitating omics-based … it has also become possible to identify speciation events within existing species. Within the JGI’s production …
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Climate-smart crops with enhanced photosynthesis.
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Genomic views of distant-acting enhancers
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… program and current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution . Mol Biol …
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Natural Prodcast Episode 15: Katherine Duncan
… because I really enjoyed the review that you wrote with Marnix on putting that stuff together. It’s been kind … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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The complete plastid genome sequence of Welwitschia mirabilis: an unusually compact plastome with accelerated divergence rates
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