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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … user facility located at Lawrence Berkeley National Laboratory, and add additional gene function descriptions. …
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Partners
… The JGI leverages its existing partnerships and develops others providing complementary … our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, …
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Convergent Bacterial Microbiotas in the Fungal Agricultural Systems of Insects
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day … Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to … crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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Beyond the census of human gut dwellers
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … stable isotope probing (SIP) proved to vastly reduce labor and improve results. Applying this method to the study …
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Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
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Diversity and genomic insights into the uncultured Chloroflexi from the human microbiota
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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
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