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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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User Support Analysis Group
… transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by … No. DE-AC02-05CH11231. The work conducted by the National Microbiome Data Collaborative ( https://ror.org/05cwx3318 ) …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology and metabolomics capabilities …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… to identify over 27,000 microbial genes. The data from that study is now used across California State … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …
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Genome-sequenced bacterial collection from sorghum epicuticular wax
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The … on developing methods for converting digital information from sequence databases into biotechnological or …
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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