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Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and …   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions of years … of tough plants. Thanks to gut microbes — namely, anaerobic fungi — these animals are able to pry apart plant polymers …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine …
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Webinar: MycoCosm Tutorial
… collection of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you … While are still working on finalizing the tree and related publication the tree is still in development and not … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… sojae, which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI and Virginia … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … Publication: Tyler BM et al. Phytophthora genome sequences …
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Comparative analysis of carboxysome shell proteins
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Comparative and pangenomic analysis of the genus Streptomyces
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …
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Comparative mitogenomics of kingdom Fungi – evolutionary insights and metagenomic applications
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … Relevant Links: Publication: Wint R et al. Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals …
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