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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … https://signon.jgi.doe.gov . This account can then be used to submit proposals, sample and project metadata, and to … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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David Goodstein
… genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors. Nature … 2017.  Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure. … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity … . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code … are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger community. Our …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** …
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process by better understanding the capabilities and resources available for your … here . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling …
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The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum
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Salt tolerance of two perennial grass Brachypodium sylvaticum accessions
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JGI Portals
… scientific community and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal … inferred host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR …
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