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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” …
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The Expanding Universe of Methane Metabolisms in Archaea
… archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … in nearly all types of anaerobic environments suggest the diversity of methane metabolisms is “vastly underestimated.” …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that …
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The complex polyploid genome architecture of sugarcane
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Genesis and Expansion of Metazoan Transcription Factor Gene Classes
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Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … and Environment (INRAE). Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples … similar functions across different forests. Primary metabolism, cell activity, and fungal development looked …
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Genetic Architecture of Flowering-Time Variation in Brachypodium distachyon  
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Ribosome-inactivation by a class of widely distributed C-tail anchored membrane proteins
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
Michelle O’Malley and Tom Lankiewicz of UC Santa Barbara discuss the importance of studying anaerobic fungi, as well as a recent discovery that turns scientific …
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Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based … Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day coding event …
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