PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
Results
Extreme Scale De Novo Metagenome Assembly
The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE
Pelagic metagenome-assembled genomes from an estuarine salinity gradient in San Francisco Bay.
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
IMG/M: the integrated metagenome data management and comparative analysis system
Protocol for condition-dependent metabolite yield prediction using the TRIMER pipeline
Metagenome of a Versatile Chemolithoautotroph from Expanding Oceanic Dead Zones
Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
Toward a Standards-Compliant Genomic and Metagenomic Publication Record
