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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of sigma …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough … activity teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews … Natural Products meeting earlier this year. And today we have our conversation with Professor Alison Narayan, from … this description, but I’d say that Alison is not one of the more normal kinds of natural products people we usually talk …
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Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria
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Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … Collaborations for User Science calls. These documents have been shared with permission from the PIs who drafted …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the … … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several …
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Finding the Fermenters
… called fermentation. To better understand the range of bacteria and archaea that rely on this form of metabolism, … in environments such as ruminant guts, sediments, and anaerobic bioreactors. Aside from producing energy that the … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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JGI@25: Using Team Science to Build Communities Around Data
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … crop plants have been manipulated over time by humans, they tend to have unusual genomes. “The OGG plants provide a true …
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Geochemistry and Mixing Drive the Spatial Distribution of Free-Living Archaea and Bacteria in Yellowstone Lake
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CRISPR — a widespread system that provides acquired resistance against phages in bacteria and archaea
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