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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … group at the JGI, whose team uses a semi-automated, standardized process to carry out the onerous SIP sample … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A robust gene-stacking method utilizing yeast assembly for plant synthetic biology
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … energy at the cellular level. Because the annotations are standardized and span the full kingdom, they are well-suited … Acids Research . The team developed and used an annotation workflow that combines three independent gene-prediction …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Overview of Laboratory Workflows for Microbial Single-Cell Genomics
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science … of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology Pathway Engineering group. His research …
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The genomic standards consortium: bringing standards to life for microbial ecology
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End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm … and viruses. Listen in to explore the data that illuminates biology, and hear how it could power our future. …
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The Genomic Standards Consortium
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … The majority of JGI projects come from the user community. Find …
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