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Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel yield … More genome copies in switchgrass leads to increased climate flexibility … From our partners …
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Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics … ONGOING ONGOING CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and … JGI and the Molecular Foundry.  Submission Deadline Feb 19, 2026 (Proposals due 4/30/26) April 9, 2026  11:59pm PT  Sep …
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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy
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Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions
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Extraordinary preservation of gene collinearity over three hundred million years revealed in homosporous lycophytes
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Meta-virus resource (MetaVR): expanding the frontiers of viral diversity with 24 million uncultivated virus genomes
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Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … Plant microbiomes hold the amazing ability to influence plant …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …
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High Density Genetic Maps of Seashore Paspalum Using Genotyping-By-Sequencing and Their Relationship to The Sorghum Bicolor Genome
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