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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … whose biomass can be renewably converted into energy or biofuels. Although a member of the grass family, as its name … complex genome whose evolutionary history and perennial lifecycle makes it important to study directly. The large and …
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FICUS-NERSC/KBASE
… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as part of the … submits a proposal for consideration in the next review cycle. All proposals undergo technical review by JGI staff …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … crust, there is a vast ecosystem connected to the global carbon cycle. Archaea are key players in this deep … harbored self-targeting CRISPR systems, metabolic modeling showed that  Ca . Huberiarchaeum would help fill in …
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Identification of a Novel Nematotoxic Protein by Challenging the Model Mushroom Coprinopsis cinerea with a Fungivorous Nematode
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Suillus: an emerging model for the study of ectomycorrhizal ecology and evolution
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Boosting Small Molecule Production in Super “Soup”
… walls they have both the machinery to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As … alternative approaches for manufacturing bioproducts and biofuels . This first report of their work, supported …
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Tour the IGB
… the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …
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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … in other algae that may be more viable for sustainable biofuel production. The JGI published a partial sequence of … within Chlamy, meaning that its RNA can produce up to four proteins, which has far-reaching implications. “This is …
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Functional Diversity of Diterpene Synthases in the Biofuel Crop Switchgrass
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How to Submit Sequencing Samples
… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: Importance of Sample QC …
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Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC
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Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
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