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… to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   …

… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … address some of the most pressing challenges of our time. For more information, please visit  …

… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction …

… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our … Each portal lists a contact, or you can reach out via the form on our website.   … Looking for BBTools? Find it here.  …

… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to … was a Bioinformatics Program Fellow at the Gordon and Betty Moore Foundation as part of the Marine Microbiology …

… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the production of large, … For further details, please reach out to the Group Lead …

… help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the …

… Miscanthus  sequence offers insights into benefits of polyploidy and … The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … year (perenniality). The Impact Among the long-term aims for bioenergy feedstock crops are increasing their yields …

… the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …

… Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and … tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the …

… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …