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In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … together over 400 proposal collaborators and co-authors with affiliations at over 180 organizations in 29 U.S. … along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is to generate …

In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And … eventually, their findings could help us grow better crops, with less impact on our planet. …

… are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible for … the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls … located in geographically distinct areas and use different plants both for laboratory research and for improving …

… three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced … of them archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the …

… 100,000 single root cells and combining the information with previously published datasets. The work was  recently … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to …

… ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ … into undergraduate teaching laboratories with minimal overhead (cost of media, ITS sequencing and … and to reduce teaching-lab costs, we have partnered with the Arizona Genomics Institute where high molecular …

… help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass … evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by … of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. …

… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are … also known as “polyploidy,” is common among flowering plants; at least once during their evolution, the genomes of …

… advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. … and many other applications. By understanding how microbes contribute to ecosystem functions, the Program …