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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
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Natural Prodcast Episode 13: Francisco Barona Goméz
… is Dan with episode 13 of National Prodcast. This continues our little section on international genome miners, and today … and also talk about some of the great science that he does. So welcome to the show Paco Barona-Gomez from the … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 … soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The JGI …
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Data Ecosystem
… facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique … modeling and understanding. JGI and KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data Resources are authoritative providers of data or capabilities …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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The Biota Project: A Case Study of a Multimedia, Grassroots Approach to Scientific Communication for Engaging Diverse Audiences.
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JGI@25: Using Team Science to Build Communities Around Data
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are … function across the phylogeny — and link these into our DOE crop plants, so we can learn from evolution that has …
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JGI@25: Studying Sorghum’s Survival Skills
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use whole-genome shotgun sequencing to analyze the 730-megabase Sorghum bicolor (L.) …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … on large-scale genomic science projects relevant to the DOE’s Office of Biological and Environmental Research (BER) …
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Natural Prodcast Episode 15: Katherine Duncan
… so I have an undergraduate in chemistry. Now when I was in fourth year, we had a choice to do an integrated master’s … awesome. I should point out that we also have a couple of projects in the lab that also work in microalgae as well. So … has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do …
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Synthetic Biology Lab
… applications group. The DNA synthesis and assembly group: Our production group operates as user facility that aims to … assembly technologies to the broader community.  We focus our efforts on integrating database mining and sequence … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …
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