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Calculating the Costs of Multiple Switchgrass Gene Copies
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in North America that has been the target of extensive natural sampling and field experiments due to its potential … (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for … 20 members from 15 institutions 300+ students 800+ iNaturalist observations All MycoEd protocols, course …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing … still able to reproduce asexually through mitosis. The alga naturally produces high amounts of oil and can grow with or … and industrial precursors — as well as to better enable the mining of critical minerals and materials. The precise …
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Improving the Cacao Genome and Phytozome
… That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is … and ensure there will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program … (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes … for enabling large-scale comparative analysis, as well as mining and visualization of big data. …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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A Shrubbier Version of Rubber
… Right now, our natural rubber comes from just one tree species: Hevea … desert shrub that’s native to North America: guayule.  This episode was made in collaboration with our friends at the …
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Characterization of the thermophilic xylanase Fsa02490Xyn from the hyperthermophile Fervidibacter sacchari belonging to glycoside hydrolase family 10
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Toward More Efficient Artificial Photosynthesis
… efficiently remove carbon from the atmosphere than current natural processes and use it as a sustainable resource for … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of Bordeaux Initiative of Excellence (IDEX Bordeaux; (ANR)-10-IDEX-03-02). T.E.M. and R.M. were supported by the …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from the …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using …
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