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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR … Berkeley National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus …
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Building Sphagnum Genomic Resources
… developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … by David Weston of Oak Ridge National Laboratory make the case for  sphagnum as “an unparalleled model system for …
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Pan genome of the phytoplankton Emiliania underpins its global distribution
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Pinning Down a Piece of Photosynthesis
The products of photosynthesis are easy to point out. Plants, algae and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … was the spark that started it all,” Blaby-Haas said. A more apt name for a Jane Doe After screening hundreds of …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute … works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … Acids Research . The project spans 15 years and involves more than 17 research groups. The team set out to …
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User Support
… work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation … your overall experience working with the JGI. Find out more about our Project Management Office (PMO) Project …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our … Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … etc., switchgrass is polyploid. This means it contains more than two copies of the genome , which can have … across hundreds of naturally-occurring genotypes (in this case, a plant’s complete genetic makeup) and 10 common …
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Brachypodium: A monocot grass model system for plant biology
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AraR plays a more dominant role than XlnR in plant biomass conversion in Penicillium subrubescens
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing … better? We could unlock new innovations to drive more productive food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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