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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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Frederik Schulz
Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome …
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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JGI Portals
… scientific community and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … Camargo developed a new pipeline for identifying viruses across many thousands of genomes and metagenomes, called …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … this be a project, we want it to be a really comprehensive learning experience.” Over the course of the year, she and … of her past year’s work at the JGI. As the students look forward to graduating high school in a few months, …
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Overview of the MOSAiC expedition: Ecosystem
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A sweet spot in marine ecosystems
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring together a “Viral EcoGenomics” community to foster … viruses, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity …
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