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JGI@25: The Little Alga That Could
… of biomass, making Chlamydomonas (affectionately known as “Chlamy” to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … Since the JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences …
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Tanja Woyke
… was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont … gears from metagenomics to single-cell genomics, which is now her primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed the Deputy Director of User Program …
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Metagenome Program
… diversity and metabolic potential, with implications for energy production, environmental sustainability, and … Sequencing technologies have expanded viral diversity knowledge, enabling global exploration. We develop … for comparative analysis and annotation of all publicly available genomes from three domains of life, in a uniquely …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our … Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … Adaptive …
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Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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JGI@25: Strengthening Soybean
… ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … niche market for soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately spurred … just one but three genomes for P. pachyrhizi , which are available on MycoCosm .  “We work on making good resistance …
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Micro-Scale Applications Group
… of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity … functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate and …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing … from high school to community college. … University of California, Merced … Alabama A&M University … CalTeach … Biotech …
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How Filamentous Fungi Sense Food
Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … carbon sources, these fungi detect which complex chains are available; this information triggers pathways to determine … Program of Berkeley Lab, among other organizations. … We acknowledge the use of deletion strains generated by Grant P01 …
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Metabolomics Program
… biogeochemical processes, development of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental sustainability, … and the bioeconomy including understanding enzymatic transformations, pathways, and how changes in metabolism can …
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Science Programs
Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … impact of user projects, develop cutting edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help maximize the JGI’s …
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