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… been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … and biosystems. It The program fosters collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. …

… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the … of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to … 555-561. The International Brachypodium Initiative. Genome sequencing and analysis of the model grass Brachypodium …

… was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon fixation process … this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is critical for plants in the … of Jeremy’s group. It’s just a massive amount of sequencing.”  A Resource for Many Applications Kellogg noted …

… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … distribution, and evolution of virophages.” Lead author David Paez-Espino  discussed an early version of the paper …

… plants don’t fully decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint … kingdom. Specifically, researchers found that female plants within a species tended to weather pH stress from peatlands’ …

… laboratories or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) … at how viruses might be influencing the methane cycling within these mangrove wetlands.” A chapter of Rambo’s … Microbial Systems group. He also worked with Simon Roux and David Paez-Espino. Rambo found the SCGSR research experience …

… Sequencing technology has changed dramatically over the … such tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI … the assembler program MetaHipMer2. Part 3: Boating Out to David Buoy — How did the mega dataset from Lake Mendota come …

… and Archaea : Under the umbrella of the GEBA, the JGI is sequencing thousands of bacterial and archaeal genomes from … — providing a perspective on giant virus diversity, and how sequencing and bioinformatics have sped up the study of … published in  Nucleic Acids Research .  ID’ing RNA viruses with ease : Searching for RNA sequences within a database …

… of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … available but also complementary single-cell sorting and sequencing of viruses together with their unicellular … Trina McMahon, University of Wisconsin-Madison; and David Walsh, Concordia University (Canada).   …