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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … growing beside a bacterium and I’m sure the opposite way around, because they’re sending messages to each other. … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … metagenomic datasets from a wide variety of ecosystems around the world, conducting iterative searches using … NERSC & JGI Seek Elusive Proteins for Gene Editing …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Phytozome workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … Interrogating the microscopic communities at work around the globe Keynote Talk Title : “Wild Microbial … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … Filling in the Plant Tree of Life …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … sense as an acronym, but there you go. A tiny bit of background on this: Most of the machinery in any living organism … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … research poster. And I was able to present at the, um, final symposium at UC Merced  Daravuth Cheam: The biggest …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics … in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity toward …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the …
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