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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication

Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.

JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad

… plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can …

Dynamic substrate preferences predict metabolic properties of a simple microbial consortium

Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments

101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens

Global overview and major challenges of host prediction methods for uncultivated phages

Genomic prediction of switchgrass winter survivorship across diverse lowland populations

Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi

An expanded evaluation of protein function prediction methods shows an improvement in accuracy

A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes

Accelerating Metagenomics Discoveries with Deep Learning

… rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … researchers are utilizing deep learning to automatically generate insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms organized into multiple interconnected layers. …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.