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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a … University of Sussex Postdoctoral training, Harvard Medical School and the University of Texas Medical School in … to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase. Nucleic Acids Res. 48: D422-D430 Wang G et al. 2019. …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Natural Prodcast Episode 9: Roger Linington
… back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser … and doing medicinal chemistry, doing development of projects on a project-by-project basis. And the more time … main reason I wanted to get you in the gaudy hotel chair today is to sort of talk about that direction of things. …
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have … Institute for Agriculture, Food and Environment (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative … of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of host-virus …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission process. You can review … ; click on the call link to see specific details including project types supported, sample/capacity limits, and … should indicate this in the proposal so we can select the project provisionally. If your project makes it successfully …
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