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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
Q:  To what extent is natural soil a limit to identify molecules exchanged between plants and microbiomes during … Metabolite Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. … in the field. By having transcriptomics data across 2 years, as well as a second field trial (which will include a …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… summer research experience at the JGI. On July 26, 2018, the JGI celebrated the culmination of the fifth summer … honor of the occasion. To a packed conference room of this year’s program cohort, mentors, alumni, and other JGI staff, … including 2018 intern Candace Cole, noted that “each year, they bring an invaluable benefit to our group’s …
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Partnerships Development Team
… with the JGI and Berkeley Lab Biosciences Area to quantify atmospheric gas mitigation properties of multiple rice …
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Progress Reports: 2002–2020
Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress Report … FY17 Progress Report … FY16 Progress …
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Trent Northen
… 2510 (2022). https://doi.org/10.1038/s41467-022-30118-9 Swift CL, et al. Anaerobic gut fungi are an untapped … Sciences. 2021 May 4;118(18). https://doi.org/10.1073/pnas.2019855118 McGivern BB et al. Decrypting bacterial … of Science (AAAS), 2022&2023 Biosciences Inventor of the Year 2019 R&D100 Award 2016 Berkeley Lab Director …
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JGI Scientists Pen Genome Watch Articles
… writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the … the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the … pathogen biology. Du Toit invited JGI to write half of the 2019 Genome Watch articles as a way to expose readers to a …
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DNA Synthesis Program
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Glacier ice archives nearly 15,000-year-old microbes and phages
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Mindfully Moving JGI
… to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three … miles away in another city and county began more than three years ago. For JGIers, the moving process began in 2017 with …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … precise genome editing. This means that scientists can modify gene expression, or delete genes, all with the rapid …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Baldrian’s team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) … referencing the database, Baldrian’s team was able to identify enzymes in the soil and who made them. Based on data … … This work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of …
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