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Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
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Improving the Cacao Genome and Phytozome
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Natural Prodcast Episode 18: A CSP Primer
… for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes …
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Natural Prodcast Episode 6: Marc Chevrette
… the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … curious about what they were, what they were doing in these genomes and how they change over time. And yeah, I mean, … MARC: Yeah, and in some cases of really extremely small genomes, like symbionts that can’t live without their host. …
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A Grass Model to Help Improve Giant Miscanthus
… explains the hybrid origin of giant miscanthus ( M. x giganteus ), a high-yield candidate bioenergy feedstock … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will … Miscanthus breeding programs. The team also sequenced genomes of numerous wild Miscanthus lineages to better …
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Examples: Successful LOIs & Submissions
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Making a Lichen Together
… For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at … The scientists also sequenced the fungus and photobiont’s genomes and compared them to close relatives who don’t …
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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those for which there were previously no genomes of symbiotic species available: 73 saprotrophs and …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years … Science Program , JGI sequenced and assembled near-complete genomes of P. hallii var. hallii (99.2% complete) and P. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … Schmutz and his team assembled and annotated the genomes at HudsonAlpha. Sujan Mamidi and Adam Healey, two of …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … flowering plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while retaining multiple copies …
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Who We Are
… access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. …
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