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Metabolomics
… metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of …
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FICUS-NERSC/KBASE
… JGI scientists as needed), and the work plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… collaborated with global researchers on projects related to understanding how the interactions between viruses and their … viral genomes. This includes (i) classifying viruses into groups that can be compared across studies, (ii) … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions
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2022 Progress Report
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Calculating the Costs of Multiple Switchgrass Gene Copies
… that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what cost?  A … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … to past climate change will provide unprecedented insight into the mechanisms that perennial grasses have and will use …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the …
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Doubling Down on Known Protein Families
… things when it comes to energy cycles — turning biomass into things like ethanol or hydrogen, or solar energy into … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic … we have not only ventured into the uncharted territory of understanding the vast landscape of functional diversity, …
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Mission
… and AI-driven analyses that convert biological information into actionable insights and solutions. Genome-enabled … sectors: Energy and bioproducts: JGI user research advances understanding of biological processes that enable cost-effective energy generation and innovative materials production. Through …
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What Happens Underground Influences Global Nutrient Cycles
… of the JGI’s Flagship genomes. She and her colleagues have generated a high-quality, phenotyped mutant library in … library leads to photosynthetic defects, offering insights into how algal ponds can regulate photosynthesis under … PNNL’s Soil Microbiome SFA, which aims for a systems-level understanding of the soil microbiome and its phenotypic …
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Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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