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JGI announces 2024 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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JGI Scientists Pen Genome Watch Articles
… Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the … Woyke was invited to present her work in London in December 2018 at a Symposium at the Royal Society. The editors at the …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome … genome analysis, sequence-based genetic methods, and comparative developmental biology. In addition to this …
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From Competition to Cooperation
… will assist researchers in moving toward functional genomics studies to learn more about the inner workings of … DE-AC02-05CH11231 within the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems … INRAE release  Large-scale genomics sheds light on the evolutionary history of …
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Improving the Cacao Genome and Phytozome
… Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate … improved  T. cacao Matina 1-6 genome is now available for comparative purposes on the latest version of the JGI plant … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The Science … metagenome assembled genomes (MAGs), and that dominant populations varied with respect to the amount of within … individually, offering scientists the opportunity to apply population genomics approaches to closely related cells …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method … Jeff Hasty. "Synchronized DNA cycling across a bacterial population." Nature genetics 49, no. 8 (2017): 1282-1285. …
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Industry Engagement Program
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A Collaboration to Improve Plant Genome Annotations Across Species
… This resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function … a subscriber? Avinash: It has been publicly available since 2018. There were more than 15 citations even before this was …
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Comparative genomics of the genus Desulfitobacterium
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Population genomics of picophytoplankton unveils novel chromosome hypervariability
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JGI@25: From Life at the Extremes to Editing Genomes
… led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … Cell. 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Harrington LB et al. Programmed DNA destruction …
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