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The Fungi That Survive In Antarctica
… Black fungi are microscopic and mighty. They survive everywhere …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… of tough plants. Thanks to gut microbes — namely, anaerobic fungi — these animals are able to pry apart plant polymers … use to bust biomass apart. She and her team find these fungi, and their enzymes, primarily in animal poop.  “As an … diversity.”  Within that diversity of bacteria and fungi, O’Malley and her team are amassing all kinds of …
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Evolution of a Fungal Gene Expression Regulator
… 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … across the fungal tree of life to date, involving more than 500 species of fungi. The Impact Interactions between plants … development. Summary With the aim of producing at least one reference genome for every family of fungi, the 1000 Fungal …
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Sequencing Technologies & Products
… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon … research on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called arbuscules into a …
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Annotation survey and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … the CSP, researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … P25111-B22, P26392-B20, and I1628-B22), the JGI (CSP 605), the German Research Foundation (DFG, PE 2147/1-1), …
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Improving the Cacao Genome and Phytozome
… Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate … the  HudsonAlpha Institute for Biotechnology . An updated reference genome for  T. cacao has now been completed and … help secure the future of chocolate with improved cacao reference genome …
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IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of these … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … it’s something we wouldn’t have even started.”  The reference genome of Setaria viridis is available on JGI’s …
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