Results

Optimizing de novo genome assembly from PCR-amplified metagenomes
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe … identifies and classifies mobile genetic elements based upon their gene content and their genetic sequences. Roux … which identified new genomes highlighting the diversity of white rot fungi in the genus Lentinula. Dan Rokhsar looked …
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The fungus that came in from the cold: dry rot’s pre-adapted ability to invade buildings
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A SNP resource for Douglas-fir: de novotranscriptome assembly and SNP detection and validation
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De novo Nanopore read quality improvement using deep learning
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Better Genome Editing for Bioenergy
CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, … could be used for renewable fuel. In fact, lipids can make up more than 90 percent of the microbe’s dry weight. In … of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s …
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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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