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… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project on National Microbiome …

… specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …

… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … that we needed to ask whether they would do the full genomes for us. So fortunately, the secondary metabolite …

… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … the JGI contributed to annotation of the genomes, available online at  PhycoCosm (for the alga genome) and  MycoCosm …

… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … final dataset – available to the research community on an online interactive browser – contains the phenotypic records …

The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … flow through and transform in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, …